Friday, April 29, 2011

Sarah Huebscher '10 ScM '11 Named Finalist in RI Business Plan Competition

Brown's Sarah Huebscher '10 ScM '11, who completed her bachelor's degree in engineering and is now a current master's degree student in the Program in Innovation Management and Entrepreneurship (PRIME), has been selected as one of eight finalists in the Rhode Island Business Plan Competition.

Huebscher is one of just three finalists in the student track. Her proposal was for PriviCare, a business that would provide at home diagnostic devices for common infections and diseases.

The finalists are competing for $250,000 in prizes. Final presentations are scheduled for May 3 at the RIBX business expo at the R.I Convention Center. Winners will be announced following the presentations. A top overall winner will take home a $50,000 cash prize.

Providence Business News story:
http://www.pbn.com/RI-Biz-Plan-Competition-announces-finalists,57682 

Brown Engineering Alumnus to Live Tweet NASA Shuttle Launch


Shareef Jackson '02, a Brown Engineering alumnus, is one of 150 tweeps chosen from more than 4,000 applicants scheduled to live tweet during the launch of the space shuttle Endeavor. You can follow him on Twitter @ShareefJackson.   

While looking back on his childhood, thirty-year-old Shareef Jackson always wanted to enjoy a summer at space camp while growing up, but he just never made it.shareef
“I’ve always been a sciency-person. I loved it as a kid, I did engineering in colleges, took a lot of astronomy classes,” he says.
His passion for astronomy continues to develop through his adult life, and in February, he started a space and technology blog from his home in West Philadelphia.
While he still wishes he could go back to his childhood and pretend to be walking on the moon at camp, he never could have imagined winning something even more out of this world: a pass to the shuttle launch of the Endeavor in Florida.
“It’s a good example of government engaging with citizens, trying to really engage in society,” he says.
Jackson is among 149 other tweeps who were randomly selected of approximately 4,000 applicants to live tweet during the launch, as well as “with the opportunity to tour the center, view the shuttle launch and speak with NASA managers, astronauts, shuttle technicians and engineers. The event also will provide participants the opportunity to meet fellow tweeps and NASA’s social media team,” according to NASA’s website.
The chosen tweeps must pay for their own travel expenses and accommodations, but he says it’s totally worth it.
“When I first started my blog, my first post was called, Lift Off. I wrote that I would go to a shuttle launch someday, but I really didn’t expect it to be this soon.”
Space Shuttle Endeavour is slated to launch on April 29th. Be sure to follow Jackson on Twitterhere, and Philly Weekly here.
- courtesy of Matthew Petrillo/PhillyNow (originally published 4/5/11)

Wednesday, April 27, 2011

Brown Alumna Kareen Riviere '03 Starts Foundation to Help Women in Haiti


Kareen Riviere  '03, a Brown engineering alumna with family in Haiti, started The Empower Foundation in December 2010 to help make "a real difference" for women and girls in Haiti. 





New Organization: The Empower Foundation Helps Haitian Women Combat Sexual Violence

(PRLEAP.COM) (Silver Spring, Md. - April 20, 2011) - "He grabbed me, stuck a gun to me. Then he and several men raped me near my daughter." Sexual assaults against women in Haiti have reached epidemic proportions since the country’s devastating earthquake in January 2010.
According to Amnesty International, more than 250 cases of rape were reported in Haiti’s 1,150 camps in the first 150 days after the earthquake. Some victims are three and five years old. The Empower Foundation (www.theempowerfoundation.org) says "something must be done now," per the organization’s founder, Kareen Riviere, Ph.D.

"The Empower Foundation is my way of getting off the sidelines and making a real difference," says Riviere. Riviere, who has family in Haiti, wanted to help the women and girls, believing they "are important players in transforming the future of Haiti."

The Silver Spring, Maryland-based non-profit was founded in December 2010 by Riviere with a mission of "empowering communities to have a voice, take action, and improve their quality of life."

The quake’s destruction left more than 1 million people homeless with women living in unsecure tent camps. Nightly, women use public latrines in poorly lit areas, vulnerable to men who may be waiting to attack them.

Police protection is nearly nonexistent, and prosecution of offenders is uncertain, making the crime repeatable. This inspired Riviere and others to enact the organization’s first mission, Operation: Empower Haiti. (Read more in The Empower Foundation’s February 2011 Report, "Operation: Empower Haiti.")

The Empower Foundation will prepare more than 1,000 safety kits for Partners in Health to deliver to its clinics in Haiti. The safety kits will contain a small battery-free flashlight, safety whistle, and local resource card. The Empower Foundation has established partnerships with businesses equally passionate to ending the violence.

"Upon learning what Haiti’s women have been enduring, we are honored to partner with The Empower Foundation to support this effort," said Felicia Evans Long, a corporate partner and founder of Sweet Events and Planning, LLC.

Monetary and supply donations are being sought to produce the safety kits.

Ways you can help:

- The Empower Foundation will host its inaugural fundraiser, a family-fun event, on Sunday, May 22, 2011 at Bowlmor Lanes, 5353 Westbard Avenue, Bethesda, Md., from 5-8 p.m.

- Empower Haiti’s women and look good while you cook. Purchase a sassy apron from corporate partner, Apron Elegance using special code "EMPOWER." Apron Elegance will donate $10 of purchase to The Empower Foundation. Shop now. http://www.apron-elegance.com/empower.html

- Donate to The Empower Foundation (www.theempowerfoundation.org)

The Empower Foundation (www.theempowerfoundation.org) is a non-profit organization dedicated to empowering people and communities to have a voice, take action, and improve their quality of life. The organization was founded in December 2010 by Kareen Riviere, Ph.D.

Brown Professor John Donoghue PhD '79 elected to American Academy of Arts and Sciences

John P. Donoghue PhD '79, the Henry Merritt Wriston Professor of Neuroscience and Engineering and director of the Brown Institute for Brain Science, has been elected to fellowship in the American Academy of Arts and Sciences. Donoghue, a pioneer researcher in brain-computer interface, is the 34th current Brown faculty member elected to AAAS fellowship.
PROVIDENCE, R.I. [Brown University] — John P. Donoghue, a Brown University neuroscientist and Department of Veterans Affairs researcher whose pioneering work has led to the development of an interface that links the human brain directly to digital devices such as computers, has been elected to the American Academy of Arts and Sciences, the AAAS announced today.
“I am deeply honored to be elected as a fellow of the academy,” said Donoghue, the Henry Merritt Wriston Professor and director of theBrown Institute for Brain Science. “To me, this is a recognition of spectacular work by a large group of faculty and students in brain science here and at our collaborating institutions and has been made possible by the remarkable interdisciplinary environment at Brown.”
The work Donoghue referred to is the development of the BrainGatebrain-computer interface. The investigational system, now in pilot clinical trials, is a combination of hardware and software that uses tiny implanted electrodes to detect electrical signals produced by neurons in the brain that control movement. The system decodes those signals and translates them into digital instructions to give people with paralysis control of external devices such as computers, robotic assistive devices, or wheelchairs.
The BrainGate team, which consists of scientists, engineers and physicians at Brown, the Providence VA Medical Center, and Massachusetts General Hospital, including co-director Leigh Hochberg, is also engaged in research aimed at giving people control of advanced prosthetic limbs.
Decades of leading neuroscience
Donoghue’s neuroscience career began in 1979 when he earned his Ph.D. at Brown after earlier studies of biology and anatomy at Boston University and the University of Vermont. He returned to Brown in 1984 as an assistant professor. He is now professor of neuroscience and engineering at Brown and a senior research scientist at the Providence VA Medical Center.
For decades, Donoghue has studied how ensembles of neurons in the brain plan and produce the signals that command the body to move. To do that, his lab uses arrays of 100 electrodes to listen to the chatter of many brain cells at once. This fundamental research led to the translational BrainGate project.
While he has developed his own research into an internationally recognized technology with significant clinical potential, he has also presided over the rapid rise of broader brain science programs at Brown. From 1992 to 2006 he served as inaugural chair of the Department of Neuroscience at the University, and in 1999 he spearheaded the formation of Brown’s Brain Science Program, which became the Brown Institute for Brain Science in 2009.
The Brown Institute for Brain Science brings together more than 100 faculty members in 15 academic departments at Brown and its affiliated hospitals. The institute is a catalyst for interdisciplinary research on the mind and brain, neurotechnology, and medical applications, as well as “smart technologies” that employ computation modeled on how the brain works.
Donoghue’s work has earned other significant awards. In 2006, he was inducted as a fellow in the American Institute for Medical and Biomedical Engineering. A year later he won the K.J. Zülch Prize, awarded by the German Reemstma Foundation and Max Planck Institute. A year later he became a fellow of the American Association for the Advancement of Science and in 2009 won the In Praise of Medicine Prize of the Erasmus University of Rotterdam, Netherlands. He received the 2010 Senior Roche Award for Translational Neuroscience.
Donoghue joins 211 other leaders in academia, business, public affairs, the humanities, and the arts in this year’s class of academy honorees, which includes two Nobel laureates and a Pulitzer Prize winner.
“I am humbled to be included among the ranks of its highly distinguished members,” Donoghue said.
Including Donoghue, Brown University has 34 faculty members who are fellows of the American Academy of Arts and Sciences.

Friday, April 15, 2011

Four Brown Students Among 16 Semifinalists in RI Business Plan Competition

A record number of people vying for a record prize pot of more than $250,000 applied to the 2011 Rhode Island Business Plan Competition, and 16 of them have been named semi-finalists, including three Brown University students and one alumnus. 

The four semifinalists with Brown engineering and entrepreneurship connections were among seven semifinalists in the student track of the competition. They included 
HnC Products led by principal applicant Margaret Watson '11. Her idea is to create a personal beverage container that can heat and cool 20 ounces between 150 and 35 degrees Fahrenheit with the flip of a switch. HnC (which stands for hot and cold) grew out of an idea from Professor Eric Suuberg's entrepreneurship class in which Watson and six other undergraduates have been working on a way to improve the taste of food eaten by astronauts who don't have access to refrigeration in space. The device uses compact thermoelectric technology, and has the potential to redefine the beverage market.

Two students from the Program in Innovation Management and Entrepreneurship (PRIME), Sara Huebscher '10 ScM '11 and Rachel Decker ScM'11 were also among the semifinalists. Decker's business plan is for PRIME Omega-3, a company which will produce and sell high quality omega-3 fish oil supplements using a safe proprietary chromatography technique. Huebscher's plan is for Privicare, which will provide at-home diagnostic devices for common infections and diseases.

Dan Aziz '11 presented a business plan for PriWater, which is developing a prenatal beverage supplement to reduce birth defects and mitigate common complications of pregnancy.

The 103 business proposals submitted this year represent a 69% increase over the number of applications received last year. To receive prizes, which will be awarded to all finalists and winners, applicants must agree to establish or continue operations in Rhode Island.



Providence Business News Release:
http://www.pbn.com/RI-Business-Plan-Competition-names-16-semi-finalists,57199

RI Business Plan Competition 2011 Release:
http://www.ri-bizplan.com/News/SemifinalistsAnnounced/tabid/237/Default.aspx

Wednesday, April 13, 2011

Tissue engineers use new system to measure biomaterials, structures

As cells assemble into a doughnut shape and ascend a hydrogel cone, they do work and thereby reveal the total power involved in forming a three-dimensional structure. That measure not only could help tissue engineers understand their living building materials better, but could also add insight to the understanding of natural tissue formation.
PROVIDENCE, R.I. [Brown University] — Tissue engineering makes biologists builders, but compared to their civil engineering counterparts, they don’t know much about the properties of the materials and structures they use, namely living cells. To improve that knowledge, Brown University researchers have developed a simple and reliable system for measuring the power that cells employ to assemble into three-dimensional tissue. The research appears online the week of April 11 in Proceedings of the National Academy of Sciences.
In addition to helping engineers evaluate how quickly and stably different cell types will combine into desired structures, the power measurements could also improve scientists’ understanding of natural tissue growth, such as in fetal development, and how cancerous cells sometimes break off from a tumor and travel in the body, said Jeffrey Morgan, the paper’s senior author and associate professor of medical science in Brown’s Department of Molecular Pharmacology, Physiology and Biotechnology.
Jacquelyn Youssef and Jeff Morgan“Cells are the ultimate building parts,” Morgan says. “It’s important to understand how they are held together, how they assemble together and the energies with which they do that, if you want to delve into the field of tissue engineering.” Credit: Mike Cohea/Brown University“Cells are the ultimate building parts, and it’s important to understand how they are held together, how they assemble together and the energies with which they do that, if you want to delve into the field of tissue engineering,” said Morgan, who last year co-developed the first artificial human ovary. “Sometimes these complex processes go wrong, and that’s where it’s relevant to cancer in terms of cell-to-cell adhesion. But it also plays out very nicely in developmental biology where a very complex 3-D orchestration of cell movement and forces gives rise to new tissues and organs.”
Climb the cone
In the system, the researchers deposited cells in very small wells made of a specially designed hydrogel. The wells each have a cone of different steepness rising in the middle, like Bundt cake pans do. The cells form a doughnut shape around the cone. The mutual attraction of the cells then causes the doughnut of living cells to slide up the cone while a video microscope watches. The observed rate at which this mass of cells overcomes the force of gravity to ascend the cone yields a valuable number for the overall power exerted by the cells.
“There’s no need to calibrate this device, because gravity is consistent and reliable and there are no moving parts other than the living cells,” Morgan said.
Such overall measures of energy, time, and power have been hard to obtain, said lead author and doctoral candidate Jacquelyn Youssef. Many scientists have studied distinct forces and energies within and among cells, such as the bonding strength between particular proteins, but such measures leave tissue engineers to estimate the total energy in a structure by adding up what’s known about the cells, related proteins, and their many interactions.
“What we’ve developed looks at all these things in this one system together,” Youssef said. “There’s lots of moving parts.”

Strong climber
Measuring cellular effort is a matter of observing how rapidly cells overcome the force of gravity and climb the cone. “There’s no need to calibrate this device, because gravity is consistent ... there are no moving parts other than the living cells,” Morgan said.
Credit: Morgan Lab/Brown University

At the same time as it offers an aggregate measure, the system allows for teasing out the relative contributions of those moving parts. In their experiments, the team, which also included Lambert Freund, professor emeritus of engineering at Brown, and recent Ph.D. graduate Asha Nurse, used a drug treatment to inhibit the contractions cells use to “grab” each other. They found that among human skin fibroblast cells, eliminating that particular action took away about half of the total power of the doughnut structure formation.
The researchers worked with two types of cells in the paper. In addition to human skin fibroblasts, which aggregated and ascended the cones in a couple of hours, they also tested liver cells, which took days to reach the same peaks.
Morgan said the system will work for many other cell types and even mixtures of cells as well, making it a promising instrument for assessing the structural characteristics of the variety of building materials that tissue engineers might choose to use in their structures. Bioengineers can also use it to measure the effect different chemicals or drugs might have on the rate or energy of tissue formation.
“What we’re driving at is an understanding of how cells will spontaneously form these three-dimensional structures,” Morgan said. “The rate at which they do that is important to understanding how to design something more complex.”
Funding for the research came from the National Science Foundation and the National Institutes of Health.

Monday, April 11, 2011

Brown's Mary Lou Jepsen '87 Ph.D'97 Named Women of Vision Award Winner

Leading Technical Women Honored for Outstanding Achievements in Technology and Innovation, Leadership and Social Impact by Anita Borg Institute 



The Anita Borg Institute for Women and Technology (ABI) has announced the winners of this year’s Anita Borg Women of Vision Awards. Chieko Asakawa, IBM Research; Mary Lou Jepsen, CEO, Pixel Qi; and Karen Panetta,Professor of Electrical and Computer Engineering and Director of the Simulation Research Laboratory at Tufts University will be honored for their accomplishments and contributions as women in technology at ABI’s sixth annual Women of Vision Awards Banquet at the Mission City Ballroom, Santa Clara, California on May 19, 2011. The event will feature keynote speaker Anousheh Ansari, first female private space explorer and first space ambassador.
The Women of Vision (WOV) Awards honor women making significant contributions to technology in three categories: Innovation, Leadership, and Social Impact. The three winners were selected from a field of highly qualified women, all of whom are engaged in technology professions in industry, academia, non-profits or government. Candidates for the awards are considered based on their records of (1) consistent, significant contributions to technology invention and application; (2) effecting positive changes in the ways in which technology impacts society; and (3) demonstrated leadership in the technology industry that extends beyond their place of work.
“The 2011 Women of Vision Award Winners have not only made significant contributions to technology but their work has broad impact on the larger world community,” said ABI CEO and President, Dr. Telle Whitney. “The three categories represent the characteristics of a Woman of Vision, whose work has broad impact on the way in which we think of technology.”
The Anita Borg Women of Vision Awards Dinner Host is Lockheed Martin. Gold sponsors are Huawei and NetApp. Silver sponsors are Cisco and IBM. Bronze Sponsors are Adobe, Career Action Center, and Thomson Reuters.
The Women of Vision Awards Dinner will also feature the first annual Anita Borg Top Company for Technical Women Award, which will be awarded to IBM. For more information about the Top Company award and why IBM was chosen, seehttp://anitaborg.org/news/archive/abi-recognizes-ibm-with-inaugural-anita-borg-top-company-for-technical-women-award/.


About the Women of Vision Award Winners
Chieko Asakawa is the Women of Vision Award winner in the Leadership category. She is recognized for her work as a leader in the field of accessibility. Her work at IBM has led to breakthrough technologies including Japan’s first computer network based Braille library system and Home Page Reader which has enabled the visually impaired to easily surf websites.  Another innovation, aDesigner, is used by Web designers today across the globe to help them build pages that are accessible to those with poor sight. aDesigner has been donated to the Eclipse Foundation, an open source community.  Chieko Asakawa was named an IBM Fellow in 2009.
Mary Lou Jepsen is the Women of Vision Award winner in the Innovation category. She is honored for her technical successes in innovative design of computer displays over several iterations including most recently as CEO of Pixel Qi, her leadership of the One Laptop Per Child (OLPC) project to accomplish its ambitious goals, and in the impact of OLPC’s work on accessibility of digital technology to enable children in all nations to use the digital tools of the modern world, and use them collaboratively.
Karen Panetta is the Women of Vision Award winner in the Social Impact category.  She is recognized not only for her contributions in both academia and industry but also as one of the United States leading experts in innovating successful low-cost methods for disseminating engineering and science to youth, parents, educators and the general public to help recruit young women to the STEM disciplines. Her Nerd Girls international program has inspired young women by teaching them that engineers and scientists create innovations for the benefit of humanity.
About the Anita Borg Institute for Women and Technology (ABI)
The Anita Borg Institute provides resources and programs to help industry, academia, and government recruit, retain, and develop women leaders in high-tech fields, resulting in higher levels of technological innovation. ABI programs serve high-tech women by creating a community and providing tools to help them develop their careers. ABI is a not-for-profit 501(c) 3 charitable organization. ABI Partners include: Google, Microsoft, HP, CA, Cisco, First Republic Bank, IBM, Intel, Intuit, Lockheed Martin, National Science Foundation, National Security Agency, NetApp, SAP, Symantec, Thomson Reuters, Wilson Sonsini Goodrich & Rosati, Motorola Foundation, Yahoo!, Amazon, Facebook, and Raytheon. For more information, visit www.anitaborg.org.

Tuesday, March 29, 2011

Brown's K.T. Ramesh named Johns Hopkins WSE’s Chair in Science and Engineering

Brown engineering alumnus K.T. Ramesh ScM '85 PhD '88, a professor of mechanical engineering at Johns Hopkins, has been named to the Whiting School of Engineering’s Alonzo G. Decker Jr. Chair in Science and Engineering, effective March 1. A dedication ceremony is planned for April 8.
“K.T. is a brilliant scholar who has also been an extremely effective leader in the Department of Mechanical Engineering, not only as chair but also as a driving force in the department’s growth,” said Nick Jones, the Benjamin T. Rome Dean of the Whiting School, in announcing Ramesh’s appointment. “He has garnered international acclaim for research that spans a wide range of subject matter, including nanostructured materials, high strain rate behavior and dynamic failure of materials, the dynamics of human tissues and planetary impact problems,” Jones said. “The common thread in all of K.T.’s research is his interest in dynamic problems with applications on scales that range from asteroid hazard mitigation to understanding and mitigating traumatic brain injury and developing strong, lightweight structural materials for personnel and vehicular protection.”
Ramesh received both his master's degree and his doctorate from Brown University. After a postdoctoral fellowship at the University of California, San Diego, he joined the Johns Hopkins Department of Mechanical Engineering in 1988, becoming department chair in 1999. He is director of the university’s Center for Advanced Metallic and Ceramic Systems, a role he has held since founding the center in 2001.
Ramesh serves on the governing boards of the American Academy of Mechanics and the Society of Engineering Science, and has played a significant role in blue-ribbon groups suggesting research and development directions for the U.S. Army and the National Academies. In addition to more than 130 peer-reviewed technical articles, he is the author of Nanomaterials: Mechanics and Mechanisms (Springer, 2009).
The Alonzo G. Decker Jr. Chair in Science and Engineering was established by Alonzo G. Decker Jr., a university trustee for more than 30 years and national chair of the Hopkins Hundreds Campaign in the 1970s, during which time he gave generously to the university, including the establishment of this endowed professorship. As chief executive officer of Black & Decker, he helped lead the manufacturing company to international prominence, devising some of its most successful products. With his wife, Virginia, he actively supported educational institutions in Maryland.
He died in 2002, and his wife in 2008. In 2007, the Homewood campus’s lower quad was dedicated as the Alonzo G. and Virginia Decker Quadrangle in honor of their legacy.
- Courtesy of Johns Hopkins

BrainGate neural interface system reaches 1,000-day performance milestone

An investigational implanted system being developed to translate brain signals toward control of assistive devices has allowed a woman with paralysis to accurately control a computer cursor at 2.7 years after implantation, providing a key demonstration that neural activity can be read out and converted into action for an unprecedented length of time.
PROVIDENCE, R.I. [Brown University] — Demonstrating an important milestone for the longevity and utility of implanted brain-computer interfaces, a woman with tetraplegia using the investigational BrainGate* system continued to control a computer cursor accurately through neural activity alone more than 1,000 days after receiving the BrainGate implant, according to a team of physicians, scientists, and engineers developing and testing the technology at Brown University, the Providence VA Medical Center, and Massachusetts General Hospital (MGH). Results from five consecutive days of device use surrounding her 1,000th day in the device trial appeared online March 24 in the Journal of Neural Engineering.
“This proof of concept — that after 1,000 days a woman who has no functional use of her limbs and is unable to speak can reliably control a cursor on a computer screen using only the intended movement of her hand — is an important step for the field,” said Dr. Leigh Hochberg, a Brown engineering associate professor, VA rehabilitation researcher, visiting associate professor of neurology at Harvard Medical School, and director of the BrainGate pilot clinical trial at MGH.
The woman, identified in the paper as S3, performed two “point-and-click” tasks each day by thinking about moving the cursor with her hand. In both tasks she averaged greater than 90 percent accuracy. Some on-screen targets were as small as the effective area of a Microsoft Word menu icon.
A brain-computer interfaceA woman with paralysis controls a computer cursor on a screen by the neural activity of intending to move it with her arm and hand. The woman, identified as S3, used the investigational BrainGate system more than 1,000 days after the device was implanted.“Our objective with the neural interface is to reach the level of performance of a person without a disability using a mouse,” said report lead author John Simeral, a VA researcher and assistant professor of engineering (research) at Brown. “These results highlight the potential for an intracortical neural interface system to provide a person that has locked-in syndrome with reliable, continuous point-and-click control of a standard computer application.”
In each of S3’s two tasks, performed in 2008, she controlled the cursor movement and click selections continuously for 10 minutes. The first task was to move the cursor to targets arranged in a circle and in the center of the screen, clicking to select each one in turn. The second required her to follow and click on a target as it sequentially popped up with varying size at random points on the screen.
From fundamental neuroscience to clinical utility
Under development since 2002, the investigational BrainGate system is a combination of hardware and software that directly senses electrical signals produced by neurons in the brain that control movement. By decoding those signals and translating them into digital instructions, the system is being evaluated for its ability to give people with paralysis control of external devices such as computers, robotic assistive devices, or wheelchairs. The BrainGate team is also engaged in research toward control of advanced prosthetic limbs and toward direct intracortical control of functional electrical stimulation devices for people with spinal cord injury, in collaboration with researchers at the Cleveland FES Center.
The system is currently in pilot clinical trials, directed by Hochberg at MGH.
BrainGate uses a tiny (4x4 mm, about the size of a baby aspirin) silicon electrode array to read neural signals directly within brain tissue. Although external sensors placed on the brain or skull surface can also read neural activity, they are believed to be far less precise. In addition, many prototype brain implants have eventually failed because of moisture or other perils of the internal environment.
“Neuroengineers have often wondered whether useful signals could be recorded from inside the brain for an extended period of time,” Hochberg said. “This is the first demonstration that this microelectrode array technology can provide useful neuroprosthetic signals allowing a person with tetraplegia to control an external device for an extended period of time.”
Moving forward
Device performance was not the same at 2.7 years as it was earlier on, Hochberg added. At 33 months fewer electrodes were recording useful neural signals than after only six months. But John Donoghue — VA senior research career scientist, Henry Merritt Wriston Professor of Neuroscience, director of the Brown Institute for Brain Science, and original developer of the BrainGate system — said no evidence has emerged of any fundamental incompatibility between the sensor and the brain. Instead, it appears that decreased signal quality over time can largely be attributed to engineering, mechanical or procedural issues. Since S3’s sensor was built and implanted in 2005, the sensor’s manufacturer has reported continual quality improvements. The data from this study will be used to further understand and modify the procedures or device to further increase durability.
“None of us will be fully satisfied with an intracortical recording device until it provides decades of useful signals,” Hochberg said. “Nevertheless, I’m hopeful that the progress made in neural interface systems will someday be able to provide improved communication, mobility, and independence for people with locked-in syndrome or other forms of paralysis and eventually better control over prosthetic, robotic, or functional electrical stimulation systems [stimulating electrodes that have already returned limb function to people with cervical spinal cord injury], even while engineers continue to develop ever-better implantable sensors.”
In addition to demonstrating the very encouraging longevity of the BrainGate sensor, the paper also presents an advance in how the performance of a brain-computer interface can be measured, Simeral said. “As the field continues to evolve, we’ll eventually be able to compare and contrast technologies effectively.”
As for S3, who had a brainstem stroke in the mid-1990s and is now in her late 50s, she continues to participate in trials with the BrainGate system, which continues to record useful signals, Hochberg said. However, data beyond the 1000th day in 2008 has thus far only been presented at scientific meetings, and Hochberg can only comment on data that has already completed the scientific peer review process and appeared in publication.
In addition to Simeral, Hochberg, and Donoghue, other authors are Brown computer scientist Michael Black and former Brown computer scientist Sung-Phil Kim.
About the BrainGate collaboration
This advance is the result of the ongoing collaborative BrainGate research at Brown University, Massachusetts General Hospital, and Providence VA Medical Center. The BrainGate research team is focused on developing and testing neuroscientifically inspired technologies to improve the communication, mobility, and independence of people with neurologic disorders, injury, or limb loss.
For more information, visit www.braingate2.org.
The implanted microelectrode array and associated neural recording hardware used in the BrainGate research are manufactured by BlackRock Microsystems, LLC (Salt Lake City, UT).
This research was funded in part by the Rehabilitation Research and Development Service, Department of Veterans Affairs; The National Institutes of Health (NIH), including NICHD-NCMRR, NINDS/NICHD, NIDCD/ARRA, NIBIB, NINDS-Javits; the Doris Duke Charitable Foundation; MGH-Deane Institute for Integrated Research on Atrial Fibrillation and Stroke; and the Katie Samson Foundation.
The BrainGate pilot clinical trial was previously directed by Cyberkinetics Neurotechnology Systems, Inc., Foxborough, MA (CKI). CKI ceased operations in 2009. The clinical trials of the BrainGate2 Neural Interface System are now administered by Massachusetts General Hospital, Boston, Mass. Donoghue is a former chief scientific officer and a former director of CKI; he held stocks and received compensation. Hochberg received research support from Massachusetts General and Spaulding Rehabilitation Hospitals, which in turn received clinical trial support from Cyberkinetics. Simeral received compensation as a consultant to CKI.
* CAUTION: Investigational Device. Limited by Federal Law to Investigational Use.

Wednesday, March 23, 2011

Dispatches From the Bat Cave - Brown is a major hub of bat research

The chamber in the basement of Hunter Lab is nearly pitch-black as a lab assistant lets loose a bat. The animal—Eptesicus fuscus, or the Big Brown Bat—flies in figure eights, dodging chains dangling from the ceiling. Outside the chamber, Jonathan Barchi, a neuroscience graduate student, looks at a monitor divided into four quadrants, each showing images from one of the infrared cameras inside the room where the bat is performing its rapid acrobatic flight.
bats_sim_cov.jpg


Barchi is counting how many full circuits of the chamber the bat flies. "Okay, six," he calls out after the bat comes to roost on a ledge in the back. The lab assistant, who has been standing to the side observing, now scoops up the animal, brings it to the front of the chamber, and then releases it again.
Barchi wants to know whether bats can have memories of where they've been, and if so, how long they last. This particular study began several months ago, when these same bats were released daily in this chamber, or Bat Cave, as it has become known. After several weeks of this routine, Barchi gave the bats a break of more than a month, and has recently brought them back to observe how much they remembered about navigating the Bat Cave. By analyzing the images of their flight, Barchi has found that the bats not only remember their environment; they may also create and retain mental images of spaces. If this is true, bats are far more intelligent than we've suspected.
Bats have become an important study animal for biologists and engineers at Brown. Barchi, for instance, works in the lab of neuroscientist and professor of biology Jim Simmons, whose goal for the last four decades has been to understand the mind of the bat: how it thinks, how fast it works, how it makes sense of the world, and how it remembers. And Simmons is just one of several prominent bat researchers at the University, which has emerged as one of the country's major hubs of bat research. In addition to Simmons, Sharon Swartz, a biology professor in the department of ecology and evolutionary biology, and Kenny Breuer '82, a professor of engineering, also work on bats, collaborating to study how their wings function and are structured. In addition, about a dozen graduate students research everything from bats' calls and brain waves to the function of the microscopic hairs on their wings.
Together, these scientists are learning a great deal about one of nature's most fascinating animals. But why do bats matter? These researchers believe that Brown's bat research could one day help change modern air transportation. It could revolutionize how we fight wars and build sonar and radar systems. It might even transform our understanding of the human brain.
From an evolutionary standpoint, bats are among natural selection's most successful animals. Twenty percent of all mammals are bats. Not only have they survived, they thrive everywhere on the planet except the north and south poles. Perhaps the greatest reason for their success is the way they fly. To watch bats do this in slow motion is to appreciate ballerinas gracefully performing turns and twists in the air. Bats can do somersaults and cartwheels. They can fly as fast as thirty miles an hour. They can perform a high-speed 180-degree turn with three flaps of their wings. A million bats can fly out of a cave at once, yet few of them will bump into one another. Because mother bats nurse their offspring until they are nearly full-size, their wings must be powerful enough to lift 25 to 50 percent of their body weight.
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Bats get around using a sonar system far more complex than any invented by humans. If the tiny shrieks they emit as they fly were at a frequency detectable by the human ear, they would sound like a blaring fire alarm next to your head. The shrieks echo off objects and bounce back to the bat, enabling it to detect surrounding objects as far away as sixty feet or as close as half a millimeter.
Sharon Swartz is an affable, warm, and genial woman with graying brown hair, big blue eyes, and an oval face. Her office is decorated with bats: stuffed toy bats, bat cutouts, and bat toys that dangle from wires. She says that as a child she had no interest in science, much less in bats, and went to college thinking she'd become a doctor. But the biology and anthropology classes she took while an undergrad at Oberlin changed all that. The first animals she studied were primates, and her PhD thesis at the University of Chicago focused on the design of the forelimb of such lesser apes as siamangs and other gibbons.
Swartz made the move from apes to bats in the late 1980s while she was teaching at Northwestern. She said she found flight fascinating—how it evolved, how it works, why it is such an efficient way for animals to get around. She also hit it off with the people she met in the bat world. "The community of people who study bats is wonderful," she says. "Bat researchers are passionate, dedicated folks who love their subject as well as doing science, and they are generous with time and expertise."
Kenny Breuer arrived at Brown in 1999, nine years after Swartz. He grew up in England, but moved to the United States with his family as a teenager and has lived here ever since. Bats were not his first interest either. With a PhD from MIT in aeronautics and astronautics, Breuer was an expert in fluid mechanics, a field of applied engineering and physics that studies the tricky question of how fluids move. Swartz says fluid mechanics is "for the mathematically fearless," and that quality was what prompted her to ask Breuer to meet over coffee and talk about bat research.
"I thought she was crazy," Breuer says. "I had never been interested in animal flight."
After more discussions, he began to see the bat's appeal. What if he could come up with a model to explain bat flight? He became interested in how the shape and properties of the bat's wing enable it to maneuver so deftly. How do air currents affect the bat's speed and the angle of its wings? He decided to take on the challenge of using mathematics to create a physical model of a bat's wings and then build an actual replica that mimics aspects of its complexity: a robotic bat.
Breuer's office is decorated with models of the Space Shuttle and toy airplanes. A poster of the Wright Flyer hangs on his wall. He hopes that understanding bat flight will eventually pave the way to building a new kind of flying machine, one whose wings might have at least some of the flexibility of a bat's. Over the years, Breuer and Swartz have achieved a number of significant advances in our understanding of the bat's wing. Bat wings are not like a bird's or an insect's. They are far more flexible. In fact, a bat wing has the same bone structure as a human hand. A nub halfway down the wing serves as the thumb. Four bones running the length of the wing act as the other fingers. And, just as in the human hand, there are joints throughout the wing, enabling individual bones to bend, pivot, and twist independently of one another.
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A bat can fold its wing in half and can angle it to adjust for wind currents in a way not possible for a bird or an insect. The skin on the wing is highly flexible, too. It can stretch to double its length. It can billow like a sail, thus reducing the amount of work the bat needs to do when taking off or gaining altitude. Swartz describes the skin as feeling soft and "membraney." It is thin enough for light to pass through.
Some of Swartz's work has focused on the thousands of microscopic hairs that lie atop the skin on the wing. Swartz says what they do or how they work is not entirely clear, but they appear to make up an elaborate sensor network that enables the bat to feel changes in wind currents.
Swartz and Breuer study bat flight using a fifteen-foot-long rectangular wind tunnel, into which they pump air up to fifteen miles an hour. With the bat flying in place, high-speed cameras film its movements, allowing the researchers to study wing movements down to a fraction of a second. The tunnel can also be filled with nontoxic aerosol particles while the bat is suspended in flight; the wings carve out patterns in the mist, leaving a wake that digital cameras can record.
In 2007, Swartz and Breuer mapped out the first high-resolution, three-dimensional models of the bat's wake fields. They showed that on the down stroke, bats keep their wings extended and curved like a sail to harness maximum wind power. On the up stroke the bats fold their wings close to their bodies, most likely to reduce drag.
Two years ago, Joe Bahlman, a graduate student in engineering and biology who works with Breuer and Swartz, set out to construct a robotic bat wing. He first used gears and a crankshaft connected to a motor to move the wing, but found it "too limiting," he says. He searched for a "more biologically inspired model."
The new wing, completed only last December, employs three motors pulling and pushing six cables to flap an eight-inch-long plastic wing skeleton. The wing has a shoulder that can move up and down and forward and back like the wing of a real bat. Joints in the wing's bones allow it to retract and open. Its major limitation is that the wing can't change its pitch, something bats routinely accomplish. As for the skin, Bahlman modified a silicon-based organic compound that is stretchy and thin enough to approximate the skin on an actual bat wing. The contraption doesn't begin to approximate the complexity of bat flight—that's "beyond the ability of any supercomputer we have," Swartz says —but it is still a significant step forward.
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The research by Swartz and Breuer is supported mostly by the National Science Foundation, but the U.S. Air Force is also a funder. The air force hopes to create a new generation of flying machines that can maneuver their way through terrain as easily as bats can. A bat-sized drone with a camera attached could fly reconnaissance and search-and-rescue missions in forests, mines, and crumbled buildings. (This would obviously have non-military applications as well.) Imagine a drone that could navigate its way through the caves in mountainous Pakistan and Afghanistan, hunting down enemy combatants.
Neuroscientist Jim Simmons looks very much as you'd expect an academic to look: scraggly white beard; glasses with thin, round titanium frames; and unkempt hair that can sometimes stick out in all directions. He talks in rapid-fire bursts, shooting out big ideas here and there and expecting you to be able to follow. His office is littered with boxes, folders, and mechanical equipment.
Simmons got into bats while he was in graduate school at Princeton in the 1960s. At the time, he was working in a lab studying the hearing of lizards, frogs, and fish. When the researcher running the bat lab left, Simmons thought, "What the heck? Great, I'll just take this over." He began by studying bat hearing, which at the time was a neglected area of research. His quest ever since has been to understand how bats "see" with their ears. Several types of bats have very good eyesight, but it doesn't do them much good when they're flying at night. Instead, they rely on their ears to pick up the echoes of their cries bouncing off the objects around them, a technique known as echolocation. Based on how long it takes for the echo to come back and which ear it strikes first, bats get an amazingly accurate sense of their environment.
According to Simmons, bats use echolocation to generate a three-dimensional map of their surroundings. The auditory inputs trigger a visual model allowing the bats to, in effect, see with their brains. Simmons hopes one day to know exactly what the world looks like to a bat—how it thinks through the images its mind generates—but first he must understand how its amazingly complex sonar system works.
In the late 1980s, Simmons performed a series of experiments on bats to gauge how the animals sort through the echoes bombarding them after they emit a call. After constructing a Y-shaped platform about six feet long, he set up audio gear at either end of the letter's top branches and placed a bat at the base of the platform. The devices received the bats' cries, produced the echoes, and then returned them to the bats. With a mealworm reward, the bat was trained to move toward the echo.
Echoes bombarded the bat from both branches of the Y, but the sounds from one were emitted a tiny fraction later than the other. The researchers wanted to see if the bat would head in one direction, and then change course when the second echo reached it from the other branch. If the bat didn't change course, it would mean the delay between the two echoes was too short for the bat to distinguish between them and so was hearing them as a single echo.
Simmons discovered that bats could distinguish between the two echoes when they were emitted as few as ten nanoseconds apart. This contradicted all the existing research. For a bat to be able to pick up a ten-nanosecond delay, its brain cells would have to process information at a faster rate than their brains were known to be capable of. Simmons's findings were considered impossible by his peers and so had to be the result of error and incorrect study design.
"They all thought we were crazy," he says.
Just a few years ago, though, Simmons's lab began taking a closer look at the cells that control hearing in a bat's brain. Through careful microscopic examination, Simmons and assistant research professor of neuroscience Seth Horowitz '93 ScM, '97 PhD detected traces of a protein called connexin 36 in the connections between these brain cells. In mammals, connexin 36 indicates that the brain cells communicate via electric charges. But bats weren't thought to have electrical synapses between neurons; the bridge, it was believed, was chemical.
Because electrical wiring in the brain works much faster than chemical connections, Horowitz's work may explain Simmons's finding from a decade earlier. More research needs to be done, but it's entirely possible that Simmons is on his way to being vindicated.
In recent years, brain researchers have been focusing more and more on the electrical synapses in human brains. The majority of our brain connections are chemical, but in regions that need to perform such quick tasks as controlling reflexes, electrical synapses are also present. Simmons hypothesizes that these electrical synapses may be far more common in the human brain than we have so far realized. It is possible that a still-undetected substratum of nerve connections in our brains is performing tasks in a way we have not yet detected, and it may be operating at speeds much faster than we've estimated. So far, this is merely conjecture, but Simmons's hunches have a way of turning out to be right. We may be more like bats than we've ever imagined.
"I would have thought that I would have gotten sick of bats long ago," says Swartz. "But I find that the longer I study bats, the more questions I have."
- By Lawrence Goodman/Brown Alumni Magazine